Epidemiology and outcomes for Staphylococcus aureus bacteraemia in Australian hospitals, 2005–06: Report from the Australian Group on Antimicrobial Resistance

The Australian Group on Antimicrobial Resistance has been monitoring resistance in S. aureus since 1986. The present study was designed to provide preliminary information on the outcomes of S. aureus bacteraemia in Australia.

Page last updated: 07 December 2007

A print friendly PDF version is available from this Communicable Diseases Intelligence issue's table of contents.

Introduction | Methods | Results | Discussion | Acknowledgements | References

John D Turnidge, Graeme R Nimmo, Julie Pearson, Thomas Gottlieb, Peter J Collignon and the Australian Group on Antimicrobial Resistance

Abstract

The Australian Group on Antimicrobial Resistance studied the epidemiology and outcomes of Staphylococcus aureus bacteraemia in selected Australian hospitals in 2005–06. Seventeen hospital-based laboratories collected basic demographic, susceptibility and patient outcome data on all cases of S. aureus bacteraemia for 5 to 24 months during the study period. There were 1,511 cases of bacteraemia documented, of which 66% occurred in males and 32% originated from vascular access devices. Bacteraemia had a community onset in 60% of cases, although 31% of these were health-care associated. Overall, 57% of episodes were health-care related. Methicillin-resistant Staphylococcus aureus (MRSA) was the responsible pathogen in 24% of instances; of these 53% were of the typical multi-resistant hospital type, and 29% were of the community-associated type. Seven per cent of all staphylococcal bacteraemias were caused by community-associated MRSA strain types, attesting to the growing size of this problem in Australia. Outcomes were available for 51% of cases and in those the all-cause mortality at seven days or discharge (whichever came earlier) was 11.2%. Age was strongly associated with mortality; the rate for patients aged more than 60 years was 18%. Sepsis originating from intravascular access devices had a lower mortality rate of 5%. S. aureus bacteraemia is a common community and hospital infection with a significant mortality. A nationally co-ordinated program documenting the incidence and outcomes of this disease would likely lead to measures designed to reduce the incidence and improve outcomes of this disease. Commun Dis Intell 2007;31:398–403.

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Introduction

Staphylococcus aureus ranks as one of the most common and important bacterial pathogens of humans.1 It is a commensal organism which, with the right conditions and pathogenic factors, can invade the host and cause a range of diseases from minor skin and soft tissue infections to osteomyelitis, endocarditis and life-threatening septicaemia. It is prevalent as a cause of infection both in the community and in hospital practice, and is one of the most common species found in positive blood cultures. Its versatility is further enhanced by its ability to acquire resistance and multiple resistance, exemplified by the emergence over time of penicillin resistance, methicillin resistance and multi-resistance, initially in hospitals and later in the community. There are currently no vaccines effective against this common pathogen.

Although it is recognised as an important cause of morbidity and mortality by infectious disease practitioners, there are limited data on the incidence of serious S. aureus sepsis in Australia, and only two regional studies on patient outcomes in patients with methicillin-resistant S. aureus sepsis.2,3 The Australian Group on Antimicrobial Resistance has been monitoring resistance in S. aureus since 1986,4,5 and has recently presented information on the large burden of bacteraemia in Australia.6 The present study was designed to provide preliminary information on the outcomes of S. aureus bacteraemia in Australia.

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Methods

Institutions

As members of the Australian Group on Antimicrobial Resistance, 17 hospital laboratories from each state and territory of Australia participated in the collection of anonymous data on cases of S. aureus bacteraemia from January 2005 to December 2006 over periods ranging from 5 to 24 months. The laboratories were in Queensland (3), New South Wales/Australian Capital Territory (3), Victoria/Tasmania (4), South Australia/Northern Territory (3), and Western Australia (4). With one exception, each laboratory serviced either a single hospital or submitted data from only one hospital.

Data collection methods

Cases of S. aureus bacteraemia were identified with the first positive blood culture from a patient with a compatible illness. Demographic data (age and sex), disease data (date of admission, onset in community or hospital, health-care association, source of infection and mortality) were collected prospectively. Cases were in general considered to have a hospital onset of infection if the time of collection of the first positive blood culture for S. aureus was more than 48 hours after admission. Mortality was measured at either seven days after the time of blood culture collection or at discharge if sooner. Participants were requested to make a judgement about the relationship between mortality and staphylococcal sepsis. No attempts were made to follow up patients after this time. The susceptibility test results were tabulated for each strain.

Data analysis

Where relevant, dichotomous outcome measures (died, survived) were compared using Chi-squared tests (for contingency tables and for trend).

Antibiograms

Strains of S. aureus were categorised according to their susceptibilities to a range of antibiotics as penicillin-susceptible, methicillin-susceptible or methicillin-resistant. Methicillin-resistant strains were further presumptively identified as being of the hospital-associated multi-resistant type (AUS-2/3-like) because of resistance to at least three of the following characterising agents: erythromycin, gentamicin, tetracycline, ciprofloxacin, and trimethoprim; hospital-associated United Kingdom type (EMRSA-15-like) due to resistance to ciprofloxacin ± erythromycin but none of the other three agents; or community-associated type (WA-1, South West Pacific, Queensland, and others) if susceptible to all characterising agents or resistant to erythromycin only among those agents.

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Results

Data were available on 1,511 cases of S. aureus bacteraemia. Two thirds of cases (66.2%) were in males, and males predominated in all age groups (Figure 1).

Figure 1. Age and sex distribution of Staphylococcus aureus bacteraemia cases, (n=1511)

Figure 1. Age  and sex distribution of Staphylococcus aureus bacteraemia cases

Numbers on the bars represent the exact numbers of females and males in each decade of life.

Associated infections

Information on the type of infection with which the bacteraemia was associated was available on 709 cases (Table 1). The most common infection overall was bacteraemia from an intravascular line, either central or peripheral, or other form of vascular access (e.g. haemodialysis shunt). These accounted for 32% of all infections seen. As expected skin/skin structure infections and bone/joint infections accounted for significant proportions of the associated infections. Endocarditis was the underlying infection in nearly 8% of all cases. Between the ages of 20 and 50, a higher proportion of bacteraemias, 8%, were due to endocarditis.

Table 1. Staphylococcus aureus infection types associated with bacteraemia

Infections
Number Percentage
(n = 709)
Intravascular access
258
36.4
IV line infection
226
31.9
Infected AV fistula
24
3.4
Other vascular
8
1.1
Skin and skin structure
143
20.2
Cellulitis/soft tissue infection
131
18.5
Infected burns
6
0.8
Infected dermatological disease
5
0.7
Furunculosis
1
0.1
Orthopaedic
107
15.1
Septic arthritis
52
7.3
Osteomyelitis
46
6.5
Discitis
9
1.3
Cardiac
54
7.6
Endocarditis
54
7.6
Respiratory tract
53
7.4
Pneumonia
50
7.1
URTI unspecified
2
0.3
Orbital cellulitis/sinusitis
1
0.1
Surgical
51
7.2
Post-operative wound infection
38
5.4
Infected vascular prosthesis
11
1.6
Infected implanted device
2
0.3
Other
43
6.1
Urinary tract infection
18
2.5
Deep abscess
10
1.4
Cholangitis
3
0.4
Meningitis
3
0.4
Febrile neutropenia
2
0.3
Gastroenteritis
2
0.3
Peritonitis
2
0.3
Post-partum endometritis
2
0.3
Early onset neonatal sepsis
1
0.1
Unknown/not stated
802

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Site of onset and health-care association

Bacteraemia had its onset in the community in 59.6% (865/1,449) of cases (Table 2). Of these, 30.9% were health-care associated (216/700 instances where information on this association was provided). In 35 instances, even though the onset was in hospital, the infection was assessed as not being associated with health care. Such cases included examples such as neonatal sepsis following acquisition from the mother, or the documentation of S. aureus from another site at the time of admission without any medical intervention that could have provoked a bacteraemia.

Table 2. Site on onset of bacteraemia and its association with health care

Onset
Health-care associated
  Yes No Unknown/not stated Total
Community
216
484
165
865
Hospital
452
35
97
584
Unknown/not stated
32
18
12
62
Total
700
537
274
1,511

Susceptibilities

Methicillin-resistant strains (MRSA) were responsible for 359 or 23.8% of infections. Of these, 191 (53%) were presumptively the typical multi-resistant hospital type (AUS-2/3-like), 44 (12%) were of the hospital type prominent in the United Kingdom (EMRSA-15-like), and 103 (29% and 6.9% overall) were of the community MRSA type (caMRSA-like). In a further 21 episodes, too few antibiotic susceptibilities were reported to be able to assign a presumptive type of MRSA. The remainder of the 1,511 strains were either penicillin susceptible (PSSA, 192 = 12.7%) or penicillin-resistant and methicillin-susceptible (MSSA, 961 = 63.6%).

For those strains where the information was provided, 87% (CI = 81%–93%) of AUS-2/3-like MRSA were health-care associated, compared to 74% (CI = 59%–88%) of EMRSA-15-like strains , 74% (CI = 55%–73%) of caMRSA-like strains, 50% (CI = 46%–53%) of MSSA and 54% (CI = 47%–62%) of PSSA strains (Table 3). Overall, methicillin-resistant strains were more likely to be health-care-associated than methicillin-susceptible strains (MSSA plus PSSA) (78% v. 51%, P <0.0001), and hospital-type MRSA (AUS-2/3-like and EMRSA-15-like) were more likely to be associated with health-care than caMRSA (84% v. 64%, P = 0.0002).

Table 3. Proportion of types of Staphylococcus aureus that were health-care associated

Type of S. aureus
Health-care associated Total Proportion health-care associated
  Yes No   (95% Confidence interval)
AUS2/3-like
115
17
132
87.1 (81.4–92.8)
EMRSA-15-like
25
9
34
73.5 (54.6–74.3)
caMRSA*-like
57
32
89
64.0 (54.1–74.0)
MRSA-unclear type
16
2
18
88.9 (74.4–100)
MSSA
401
405
806
49.8 (46.3–53.2)
PSSA
86
72
158
54.4 (46.7–62.2)
Total
700
537
1237
56.6 (53.8–59.4)

* Community-associated MRSA.

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Outcomes

Outcomes were available for 768 cases (51%). The all-cause mortality in this group was 11.2% (86 cases) (Table 4). The documented attributable mortality was 39/768 or 5.1%, although this is likely to be an underestimate as the cause of death was not documented in 29 of the 86 cases. Given that most of the data were collected from a laboratory base, the reliability of attribution of cause for mortality was not considered high, and thus subsequent analyses were undertaken with the all-cause mortality data.

The most significant factor associated with death was age, as highlighted in Figure 2 (and Table 5). Mortality was greater than 20% in patients aged over 80 years, with an overall trend to lower percentages the younger the patient. Survival was not influenced by sex, place of onset of sepsis, health-care versus non-health-care association, or β-lactam resistance of any type. Mortality was significantly reduced when the source of the infection was an intravascular line.

Table 4. Outcomes on cases

Outcome at 7d or at discharge if earlier
Number of cases
Death due to sepsis
9
Death due to sepsis and other causes
30
Death from other causes
18
Death from undocumented cause
29
Subtotal
86
Patient alive but on-going sepsis
79
Patient recovered
510
Patient recovered but with significant new morbidity
41
Patient survived at 7 days
52
Subtotal
682
Unknown/Not stated
743

Table 5. Potential risk factors for mortality

Factor
Group Died Survived % Mortality P
Age
< 60 years
20
378
5.0
< 0.0001
 
≥60 years
66
304
17.8
Sex
Female
34
245
12.2
NS*
 
Male
52
437
10.6
Health-care associated
Yes
41
345
10.6
NS
 
No
41
299
12.1
Place of onset
Community
49
413
10.6
NS
 
Hospital
36
269
11.8
Source
IV line
9
168
5.1
0.003
 
Not an IV line
77
514
13.0
Methicillin-resistant strain
Yes
14
135
9.4
NS
 
No
72
547
11.6
β-lactam resistance
Penicillin-susceptible
13
103
11.2
NS
 
Methicillin-susceptible
59
444
11.7
 
Methicillin-resistant
14
135
9.4
NS
Methicillin-resistant type
AUS-2/3-like
8
51
13.6
NS
 
EMRSA-15-like
3
17
15.0
 
caMRSA-like
3
56
5.1

* Not significant.

† Intravascular line or access.

Figure 2. Age stratified mortality rates Staphylococcus aureus bacteraemia cases, (n=768).

Figure 2. Age  stratified mortality rates Staphylococcus  aureus bacteraemia cases

Numbers on the bars represent the exact percentages in each decade of life.

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Discussion

Our data show than S. aureus bacteraemia remains a common problem in Australia. Unfortunately, we do not have accurate information on what proportion of the Australian population was served by the participating sites, so we could not estimate the true rates of sepsis in our population. However, our previous study showed that 0.15% of hospital admissions in Australia were for S. aureus bacteraemia and estimated that about 6,900 episodes occur annually in Australia.6 Based on the average of 13.8 months of data collected from the 17 laboratories, we estimate that we captured about one fifth (approximately 1,300 per year) of all bacteraemias occurring nationally during the study period, and therefore our study provides at least an indicative sample of the problem.

The proportion of cases (24%) caused by methicillin-resistant strains is slightly higher than our previous observations (19%).6 This may relate to the lower number of laboratories serving private hospitals captured in this study compared to the previous study or a genuine increase in the prevalence of MRSA types. More importantly, we were able to estimate what proportion was due to strains with a resistance profile resembling community-associated MRSA. The finding of 7% of all bacteraemias being due to community-associated MRSA attests to the growing size of this problem in Australia.7 More surprising was the finding that the major proportion of caMRSA were the cause of health-care associated infections. Outbreaks of caMRSA in hospitals in Australia have been reported,8 but are not common, and it is more likely that the health-care association is related to increasing rates of colonisation in the community. One seminal study has shown that nasal carriage, most of it present at the time of initiation of health care, accounts for about 80% of subsequent health-care associated bacteraemias.9

The crude mortality rate is in the range observed in recent studies from Australia and other countries in adults10–15 and children.16–19 Because direct follow-up after seven days or discharge was not required as part of data collection, we believe that the mortality rate observed is lower than the true figure. We confirmed the very strong association between age and outcome. Mortality rates were significantly lower when the source of infection was an intravascular line or from other vascular access, but no other factor that we examined influenced mortality significantly. In particular, we did not show increased mortality in patients with MRSA infection, which is seen in some series and not others.20

Unfortunately, despite the incidence, importance and severity of staphylococcal bacteraemia, there is currently no mechanism in place nationally to monitor incidence and outcomes.21 This infection is substantially more common and has a higher mortality rate than meningococcal sepsis,22,23 and yet remains a 'disease in the background'. This is in part because outbreaks in the community have been difficult to detect due to the substantial incidence of sporadic cases. Their substantial impact has therefore been overlooked by the community, the media or public health authorities. However, the recent acquisition of methicillin-resistance by virulent strains has provided a prominent phenotypic marker (Panton-Valentine leukocidin) that has made the epidemic nature of these infections obvious. Their association with deaths in young otherwise healthy children and adults24,25 has emphasised their importance as a potential target for public health and clinical intervention even more. Emergence of community-associated MRSA highlights the need for a national approach to a growing problem, and our study supports the call for mandatory central reporting of S. aureus bacteraemia, but one that also includes community-onset disease, as happens in the United Kingdom.26 Only then will we be in a position to design better intervention tools.

We recognise that our methods for measuring outcomes had limitations and were subject to possible bias. Not all participating laboratories were able to provide outcome data. Those who did provide data were not audited for accuracy of data capture, and judgements about attributable mortality are acknowledged to be subjective. Nevertheless, we feel that our data provide the first national indication of the importance of serious S. aureus infection in the Australian community, and they should drive the future development of robust systems for measuring and improving outcomes of this common infection.

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Acknowledgements

This study was supported in part by a grant from the Australian Government Department of Health and Ageing.

The participating laboratories were from: The Alfred Hospital (D Spelman, C Franklin); Concord Hospital (T Gottlieb, G Funnell); Fremantle Hospital–PathWest (D McGechie, G Francis); Royal Adelaide Hospital–Institute for Medical and Veterinary Science (I Bastian, R Pratt); John Hunter Hospital (J Ferguson, J Anderson); Launceston General Hospital (E Cox, K Wilcox); Monash Medical Centre (T Korman, D Kotsanas); Princess Alexandra Hospital (J Faoagali, G Lye), Royal Brisbane and Women’s Hospital–Pathology Queensland, (G Nimmo, N George); The Prince Charles Hospital–Pathology Queensland (C Coulter, S Gribble), Queen Elizabeth II Medical Centre–PathWest (C Gollege, B Henderson); Royal Darwin Hospital (G Lum, P Southwell); Royal Perth Hospital–PathWest (J Pearson, K Christiansen, G Coombs); St John of God Hospital, Perth (S Benson, J Fenton); StVincent’s Hospital, Melbourne (MJ Waters, L Joyce); The Canberra Hospital (P Collignon, S Bradbury, J Roberts); Women’s and Children’s Hospital (J Turnidge, J Bell).

Author details

John D Turnidge1

Graeme R Nimmo2

Julie Pearson3

Thomas Gottlieb4

Peter J Collignon5

Australian Group on Antimicrobial Resistance

1. Director, Division of Laboratory Medicine, Women’s and Children’s Hospital, North Adelaide, South Australia

2. Director of Microbiology, Pathology Queensland Central Laboratory, Herston, Queensland

3. Scientific Officer for the Australian Group on Antimicrobial Resistance, Department of Microbiology and Infectious Diseases, PathWest Laboratory Medicine WA, Royal Perth Hospital, Western Australia

4. Clinical Microbiologist and Infectious Diseases Physician, Department of Microbiology and Infectious Diseases, Concord Hospital, Concord, New South Wales

5. Director of Microbiology and Infectious Diseases, Canberra Hospital, Garran, Australian Capital Territory

Corresponding author: Professor John Turnidge, Division of Laboratory Medicine, Women’s and Children’s Hospital, 72 King William Road, NORTH ADELAIDE SA 5062. Telephone: +61 8 8161 6873. Facsimile: +61 8 8161 6189. Email: john.turnidge@cywhs.sa.gov.au

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